Department of Biology

Biolinux Documentation

Getting Started on Biolinux

Linux and the BASH Shell

Bioinformatics Software on Biolinux

Before installing additional software (ie in your home directory) check here to make sure it is not already installed on Biolinux. If not, please contact Todd Vision. It might well be something we would like to install and configure for general use.
 
    ArrayOligoSelector
    clustalw 1.82
    consed
    dialign 2.2
    EMBOSS 2.7.1
    FPC 7.2
    GenScan
    GLIMMER 2.10
    HYPHY 0.99b
    mapmaker 3.0b
    mfold
    Mr.Bayes 3.0
    NCBI-BLAST 2.2.6
    PAML 3.13
    phrap 0.990329
    phred
    Phylip 3.6
    phylocom 3.21
    QTLCartographer
    seg 0.00
    swarm 2.1.147
    T_COFFEE 1.37
    TMeV (type "tmev" to execute)
    VirginiaCreeper 1.0.7
    wise2 2.1.23c
    WU-BLAST 2.0
    Xcluster 0.0

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